Taxation of Non-profit Organizations in Lagos State: Compliance Requirements.


Non-profit organizations play a vital role in contributing to social welfare, education, healthcare, and various charitable causes in Lagos State, Nigeria. While these organizations are established with noble intentions, they are still subject to certain taxation and compliance requirements to ensure transparency, accountability, and effective utilization of resources. In this article, we will explore the taxation of non-profit organizations in Lagos State and highlight the compliance requirements they must adhere to.

  • Registration and Legal Structure: Non-profit organizations in Lagos State are required to register with appropriate government agencies, such as the Corporate Affairs Commission (CAC) and the Lagos State Ministry of Justice. The chosen legal structure, such as an incorporated trustee or a company limited by guarantee, determines the organization’s tax obligations and reporting requirements.
  • Tax Exemption and Deductibility: While non-profit organizations are generally exempt from paying income tax, they must obtain a Tax Exemption Certificate from the Lagos State Internal Revenue Service (LIRS). Additionally, donations and contributions made to registered non-profit organizations may be tax-deductible for donors, subject to certain conditions.
  • Annual Returns and Financial Reporting: Non-profit organizations are required to submit annual returns and financial statements to the relevant authorities. These reports provide transparency about the organization’s financial activities and ensure proper utilization of funds for charitable purposes.
  • Utilization of Funds: Non-profit organizations are expected to use their funds solely for charitable, educational, or social welfare purposes. Any diversion of funds for personal gain or unrelated business activities can lead to loss of tax-exempt status and legal repercussions.
  • Property Tax and Land Use Charge: While non-profit organizations are exempt from certain taxes, they may still be subject to property tax and land use charge if they own or lease properties in Lagos State. The LIRS assesses the value of properties and determines the applicable charges.
  • Withholding Tax on Payments: Non-profit organizations making payments for services or contracts are required to deduct and remit withholding tax to the tax authorities, as applicable. Failure to comply with withholding tax obligations can result in penalties.
  • Compliance with Tax Laws: Non-profit organizations must adhere to all relevant tax laws and regulations. This includes proper record-keeping, accurate financial reporting, and timely submission of required documents to the appropriate government agencies.
  • Foreign Donor Reporting: Non-profit organizations that receive foreign donations are required to report these donations to the Nigerian Financial Intelligence Unit (NFIU) through designated banks. This reporting helps prevent money laundering and ensures the legitimacy of funding sources.


The taxation of non-profit organizations in Lagos State is designed to strike a balance between encouraging charitable activities and ensuring proper governance and accountability. Non-profit organizations must diligently adhere to compliance requirements, including registration, obtaining tax-exemption status, filing annual returns, and maintaining transparent financial records.

By fulfilling these obligations, non-profit organizations can continue to make a positive impact on society while upholding their legal and ethical responsibilities. Engaging with experienced accounting professionals can provide invaluable guidance to navigate the complexities of non-profit taxation and compliance, enabling these organizations to focus on their core mission of contributing to the well-being of the community and advancing social causes.

For professional advice on Accountancy, Transfer Pricing, Tax, Assurance, Outsourcing, online accounting support, Company Registration, and CAC matters, please contact Sunmola David & CO (Chartered Accountants & Tax Practitioners) at Lagos, Ogun state Nigeria offices, You can also reach us via WhatsApp at +2348038460036.